For human sample

From Tgi.kr

For human sample

Language: python

input file: SAM file (mapped to human reference genome)

See example in Tiger sever: /BiO/Research/Project2/TGI-DevilsGate-AncientGenome-2015-11/Anlaysis/Sex_determination

 

Reference

  • Skoglund, Pontus, et al. "Accurate sex identification of ancient human remains using DNA shotgun sequencing." Journal of Archaeological Science 40.12 (2013): 4477-4482.