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<p>- (발명자)&nbsp;공통서열을 포함한 참조표준 게놈지도 구축 장치 및 방법 (1020170006310, 대한민국 특허청 출원), 2017</p>
<p>- (발명자)&nbsp;공통서열을 포함한 참조표준 게놈지도 구축 장치 및 방법 (1020170006310, 대한민국 특허청 출원), 2017</p>
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<p>- (발명자) 질병 및 표현형 위험도 예측 장치 및 방법&nbsp;(1020170179635, 대한민국 특허청 출원), 2017</p>
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<p>- (발명자) 가상인구집단 유전형 데이터 생성 장치 및 방법 (1020170179683, 대한민국 특허청 출원), 2017</p>
<p><span style="font-size:larger">&nbsp;</span></p>
<p><span style="font-size:larger">&nbsp;</span></p>

Latest revision as of 09:46, 26 December 2017

학위

2015-2017                                  생명공학 박사, UNIST (Ulsan National Institute of Science and Technology)

2009-2011                                  생명정보학 석사, 숭실대학교

2003-2009                                  생명정보학 학사, 숭실대학교

 

이력

2011.11-2014.06                       선임연구원, 재단법인 게놈연구재단 

2014.07-2017.06                      부소장 및 책임연구원, 재단법인 게놈연구재단

2014.07-2017.06                      TGI (게놈연구소) 부소장, UNIST

 

전문분야

- 생명정보학: 표준게놈지도, 게놈프로젝트, 비교유전체, 암 유전체 분석

- 화학정보학: 단백질 모델링, 화합물 계산

 

논문

- (co-corresponding author) Myotis rufoniger genome sequence and analyses: M. rufoniger's genomic feature and the decreasing effective population size of Myotis bats.

Bhak Y, Jeon Y, Jeon S, Chung O, Jho S, Jun J, Kim HM, Cho Y, Yoon C, Lee S, Kang JH, Lim JD, An J, Cho YS, Ryu DY, Bhak J. PLoS One 12, e0180418 (2017).

 

- (co-author) Genome-wide data from two early Neolithic East Asian individuals dating to 7700 years ago.

Siska V, Jones ER, Jeon S, Bhak Y, Kim HM, Cho YS, Kim H, Lee K, Veselovskaya E, Balueva T, Gallego-Llorente M, Hofreiter M, Bradley DG, Eriksson A, Pinhasi R, Bhak J, Manica A. Sci. Adv. 3, e1601877 (2017).

 

- (co-author) Perspectives provided by leopard and other cat genomes: how diet determined the evolutionary history of carnivores, omnivores, and herbivores.

Kim S, Cho YS, Bhak J, O'Brian SJ, Yeo JH. BMB Rep. 50, 3-4 (2017).

 

- (co-author) Analysis of the FGF gene family provides insights into aquatic adaptation in cetaceans.

Nam K, Lee KW, Chung O, Yim HS, Cha SS, Lee SW, Jun J, Cho YS, Bhak J, Magalhães JP, Lee JH, Jeong JY. SciRep. 7, 40233 (2017).

 

- (co-first author) An ethnically relevant consensus Korean reference genome is a step towards personal reference genomes.

Cho YS, Kim H, Kim HM, Jho S, Jun J, Lee YJ, Chae KS, Kim CG, Kim S, Eriksson A, Edwards JS, Lee S, Kim BC, Manica A, Oh TK, Church GM, Bhak J. Nat. Commun. 7, 13637 (2016).

 

- (co-first author) Comparison of carnivore, omnivore, and herbivore mammalian genomes with a new leopard assembly.

Kim S, Cho YS, Kim HM, Chung O, Kim H, Jho S, Seomun H, Kim J, Bang WY, Kim C, An J, Bae CH, Bhak Y, Jeon S, Yoon H, Kim Y, Jun J, Lee H, Cho S, Uphyrkina O, Kostyria A, Goodrich J, Miquelle D, Roelke M, Lewis J, Yurchenko A, Bankevich A, Cho J, Lee S, Edwards JS, Weber JA, Cook J, Kim S, Lee H, Manica A, Lee I, O'Brien SJ, Bhak J, Yeo JH. Genome Biol. 17, 211 (2016).

 

(co-authorThe genetics of an early Neolithic pastoralist from the Zagros, Iran.

Gallego-Llorente M, Connell S, Jones ER, Merrett DC, Jeon Y, Eriksson A, Siska V, Gamba C, Meiklejohn C, Beyer R, Jeon S, Cho YS, Hofreiter M, Bhak J, Manica A, Pinhasi R. Sci. Rep. 6, 31 (2016).

 

(co-first authorThe first whole genome and transcriptome of the Cinereous vulture reveals adaptation in the gastric and immune defense systems and possible convergent evolution between the Old and New World vultures.

Chung O, Jin S, Cho YS, Lim J, Kim H, Jho S, Kim HM, Jun J, Lee H, Chon A, Ko J, Edwards J, Weber JA, Han K, O'Brien SJ, Manica A, Bhak J, Paek WK. Genome Biol. 16, 215 (2015).

 

 - (co-author) Gene loss in keratinization programs accompanies adaptation of Cetacean skin to aquatic lifestyle.

Oh JW, Chung O, Cho YS, MacGregor GR, Plikus MV. Exp. Dermatol. doi: 10.1111/exd.12756. (2015).

 

- (co-author) Whole genome sequencing of an ethnic Pathan (Pakhtun) from the north-west of Pakistan.

Ilyas M, Kim JS, Cooper J, Shin YA, Kim HM, Cho YS, Hwang S, Kim H, Moon J, Chung O, Jun J, Rastogi A, Song S, Ko J, Manica A, Rahman Z, Husnain T, Bhak J. BMC Genomics 16:172 (2015).

 

- (co-author) Molecular adaptation of the CREB-Binding Protein for aquatic living in cetaceans.

Jeong JY, Chung OS, Ko YJ, Lee KW, Cho YS, Bhak J, Yim HS, Lee JH. J. Mar. Biosci. Biotechnol. 6, 102-109 (2014).

 

- (co-first author) Whole genome sequence and analysis of the Marwari horse breed and its genetic origin.

Jun J, Cho YS, Hu H, Kim HM, Jho S, Gadhvi P, Park KM, Lim J, Paek WK, Han K, Manica A, Edwards JS, Bhak J. BMC Genomics 15(Suppl 9), S4 (2014).

 

- (co-author) Variation block-based genomics method for crop plants.

Kim YH, Park HM, Hwang TY, Lee SK, Choi MS, Jho S, Hwang S, Kim HM, Lee D, Kim BC, Hong CP, Cho YS, Kim H, Jeong KH, Seo MJ, Yun HT, Kim SL, Kwon YU, Kim WH, Chun HK, Lim SJ, Shin YA, Choi IY, Kim YS, Yoon HS, Lee SH, Lee S. BMC Genomics 15, 477 (2014).

 

- (co-first author) Genomic profile analysis of diffuse-type gastric cancers.

Lee YS, Cho YS, Lee GK, Lee S, Kim YW, Jho S, Kim HM, Hong SH, Hwang JA, Kim SY, Hong D, Choi IJ, Kim BC, Kim BC, Kim CH, Choi H, Kim Y, Kim KW, Kong G, Kim HL, Bhak J, Lee SH, Lee JS. Genome Biol. 15, R55 (2014).

 

- (co-first author) Minke whale genome and aquatic adaptation in cetaceans.

Yim HS, Cho YS, Guang X, Kang SG, Jeong JY, Cha SS, Oh HM, Lee JH, Yang EC, Kwon KK, Kim YJ, Kim TW, Kim W, Jeon JH, Kim SJ, Choi DH, Jho S, Kim HM, Ko J, Kim H, Shin YA, Jung HJ, Zheng Y, Wang Z, Chen Y, Chen M, Jiang A, Li E, Zhang S, Hou H, Kim TH, Yu L, Liu S, Ahn K, Cooper J, Park SG, Hong CP, Jin W, Kim HS, Park C, Lee K, Chun S, Morin PA, O'Brien SJ, Lee H, Kimura J, Moon DY, Manica A, Edwards J, Kim BC, Kim S, Wang J, Bhak J, Lee HS, Lee JH. Nat. Genet. 46, 88-92 (2014).

 

(co-first authorWhole genome comparison of donor and cloned dogs.

Kim HM, Cho YS, Kim H, Jho S, Son B, Choi JY, Kim S, Lee BC, Bhak J, Jang G. SciRep. 3, 2998 (2013).

 

(co-first authorThe tiger genome and comparative analysis with lion and snow leopard genomes.

Cho YS, Hu L, Hou H, Lee H, Xu J, Kwon S, Oh S, Kim HM, Jho S, Kim S, Shin YA, Kim BC, Kim H, Kim CU, Luo SJ, Johnson WE, Koepfli KP, Schmidt-Küntzel A, Turner JA, Marker L, Harper C, Miller SM, Jacobs W, Bertola LD, Kim TH, Lee S, Zhou Q, Jung HJ, Xu X, Gadhvi P, Xu P, Xiong Y, Luo Y, Pan S, Gou C, Chu X, Zhang J, Liu S, He J, Chen Y, Yang L, Yang Y, He J, Liu S, Wang J, Kim CH, Kwak H, Kim JS, Hwang S, Ko J, Kim CB, Kim S, Bayarlkhagva D, Paek WK, Kim SJ, O'Brien SJ, Wang J, Bhak J. NatCommun. 4, 2433 (2013).

 

- (co-author) The Genetic Basis of White Tigers.

Xu X, Dong GX, Hu XS, Miao L, Zhang XL, Zhang DL, Yang HD, Zhang TY, Zou ZT, Zhang TT, Zhuang Y, Bhak J, Cho YS, Dai WT, Jiang TJ, Xie C, Li R, Luo SJ. Curr. Biol. 23, 1031-1035 (2013).

 

- (co-author) Twelve Positions in a b-Lactamase That Can Expand Its Substrate Spectrum with a Single Amino Acid Substitution.

Yi H, Cho KH, Cho YS, Kim K, Nierman WC, Kim HS. PLoS One 7, e37585 (2012).

 

- (first author) yaInChI: Modified InChI string scheme for line notation of chemical structures.

Cho YS, No KT, Cho KH. SAR. QSAR. Environ. Res. 23, 237-255 (2012).

 

특허

- (발명자) 이성질체를 구별하는 화합물의 문자열 표현장치 및 방법, 그리고 이를 이용한 화합물 검색장치 및 방법 (1012369660000, 대한민국 특허청 등록), 2013

- (발명자) 백색 털 형질에 대한 신규 단일염기변이 마커 (101480207, 대한민국 특허청 등록), 2014

- (발명자) 저산소증 적응 형질에 대한 신규 단일염기변이 마커 (101480208, 대한민국 특허청 등록), 2014

- (발명자) 밍크고래의 유전체로부터 분리된 신규의 당화 효소 및 이의 제조방법 (1020130065886, 대한민국 특허청 출원), 2013

- (발명자) 밍크 고래의 유전체로부터 분리된 신규의 안지오텐신 변환 효소 2 및 이의 제조방법 (1020130065885, 대한민국 특허청 출원), 2013

- (발명자) 밍크 고래의 유전체로부터 분리된 신규의 리파제 및 이의 제조방법 (1020130065884, 대한민국 특허청 출원), 2013

- (발명자) 정확도가 높은 긴 게놈 DNA의 서열 해독 방법 (1020160178332, 대한민국 특허청 출원), 2016

- (발명자) 질병의 상태 지수 예측 장치 및 방법 (1020160158000, 대한민국 특허청 출원), 2016

- (발명자) 다중 컨티그를 이용한 게놈 서열 조립 장치 및 방법 (1020160159981, 대한민국 특허청 출원), 2016

- (발명자) 공통서열을 포함한 참조표준 게놈지도 구축 장치 및 방법 (1020170006310, 대한민국 특허청 출원), 2017

- (발명자) 질병 및 표현형 위험도 예측 장치 및 방법 (1020170179635, 대한민국 특허청 출원), 2017

- (발명자) 가상인구집단 유전형 데이터 생성 장치 및 방법 (1020170179683, 대한민국 특허청 출원), 2017

 

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